showcase

2023

1. Machine-learning Assisted Swallowing Assessment: a deep learning-based quality improvement tool to screen for post-stroke dysphagia

   Rami Saab, Arjun Balachandar, Hamza Mahdi, Eptehal Nashnoush, Lucas Perri, Ashley Waldron, Alireza Sadeghian, Gordon Rubenfeld, Mark Crowley, Mark I. Boulos, Brian Murray, and Houman Khosravani.

   Frontiers in Neuroscience. 17, Nov, 2023.

   Abs Code URL

   Post-stroke dysphagia is common and associated with significant morbidity and mortality, rendering bedside screening of significant clinical importance. Using voice as a biomarker coupled with deep learning has the potential to improve patient access to screening and mitigate the subjectivity associated with detecting voice change, a component of several validated screening protocols. In this single-center study, we developed a proof-of-concept model for automated dysphagia screening and evaluated the performance of this model on training and testing cohorts. Patients were admitted to a comprehensive stroke center, where primary English speakers could follow commands without significant aphasia and participated on a rolling basis. The primary outcome was classification either as a pass or fail equivalent using a dysphagia screening test as a label. Voice data was recorded from patients who spoke a standardized set of vowels, words, and sentences from the National Institute of Health Stroke Scale. Seventy patients were recruited and 68 were included in the analysis, with 40 in training and 28 in testing cohorts, respectively. Speech from patients was segmented into 1,579 audio clips, from which 6,655 Mel-spectrogram images were computed and used as inputs for deep-learning models (DenseNet and ConvNext, separately and together). Clip-level and participant-level swallowing status predictions were obtained through a voting method. Model performance on the individual clip-level demonstrated dysphagia screening sensitivity of 71% and specificity of 77% (F1=0.73, AUC=0.80 [95% CI: 0.78-0.82]. On the participant-level the sensitivity and specificity were 89% and 79% respectively (F1=0.81, AUC=0.91 [95% CI: 0.77–1.05]). Our study is the first to demonstrate the feasibility of applying deep learning to classify vocalizations to detect post-stroke dysphagia.

2. ChemGymRL

   ChemGymRL: An Interactive Framework for Reinforcement Learning for Digital Chemistry

   Chris Beeler, Sriram Ganapathi Subramanian, Kyle Sprague, Nouha Chatti, Colin Bellinger, Mitchell Shahen, Nicholas Paquin, Mark Baula, Amanuel Dawit, Zihan Yang, Xinkai Li, Mark Crowley, and Isaac Tamblyn.

   In ICML 2023 Synergy of Scientific and Machine Learning Modeling (SynS&ML) Workshop. Jul, 2023.

   Abs PDF Code Poster Slides URL

   This paper provides a simulated laboratory for making use of Reinforcement Learning (RL) for chemical discovery. Since RL is fairly data intensive, training agents ‘on-the-fly’ by taking actions in the real world is infeasible and possibly dangerous. Moreover, chemical processing and discovery involves challenges which are not commonly found in RL benchmarks and therefore offer a rich space to work in. We introduce a set of highly customizable and open-source RL environments, ChemGymRL, based on the standard Open AI Gym template. ChemGymRL supports a series of interconnected virtual chemical benches where RL agents can operate and train. The paper introduces and details each of these benches using well-known chemical reactions as illustrative examples, and trains a set of standard RL algorithms in each of these benches. Finally, discussion and comparison of the performances of several standard RL methods are provided in addition to a list of directions for future work as a vision for the further development and usage of ChemGymRL.

3. Multi-Advisor-QL

   Multi-Agent Advisor Q-Learning

   Sriram Ganapathi Subramanian, Kate Larson, Matthew Taylor, and Mark Crowley

   In International Joint Conference on Artificial Intelligence (IJCAI) : Journal Track. Macao, China. Aug, 2023.

   Abs PDF Code URL Video

   In the last decade, there have been significant advances in multi-agent reinforcement learn- ing (MARL) but there are still numerous challenges, such as high sample complexity and slow convergence to stable policies, that need to be overcome before wide-spread deployment is possi- ble. However, many real-world environments already, in practice, deploy sub-optimal or heuristic approaches for generating policies. An interesting question that arises is how to best use such approaches as advisors to help improve reinforcement learning in multi-agent domains. In this paper, we provide a principled framework for incorporating action recommendations from online sub- optimal advisors in multi-agent settings. We describe the problem of ADvising Multiple Intelligent Reinforcement Agents (ADMIRAL) in nonrestrictive general-sum stochastic game environments and present two novel Q-learning based algorithms: ADMIRAL - Decision Making (ADMIRAL-DM) and ADMIRAL - Advisor Evaluation (ADMIRAL-AE), which allow us to improve learning by appropriately incorporating advice from an advisor (ADMIRAL-DM), and evaluate the effectiveness of an advisor (ADMIRAL-AE). We analyze the algorithms theoretically and provide fixed point guarantees regarding their learning in general-sum stochastic games. Furthermore, extensive experi- ments illustrate that these algorithms: can be used in a variety of environments, have performances that compare favourably to other related baselines, can scale to large state-action spaces, and are robust to poor advice from advisors.

4. GCRL

   Generative Causal Representation Learning for Out-of-Distribution Motion Forecasting

   Shayan Shirahmad Gale Bagi, Zahra Gharaee, Oliver Schulte, and Mark Crowley

   In International Conference on Machine Learning (ICML). Honolulu, Hawaii, USA. Jul, 2023.

   Abs arXiv PDF Code Poster Hypoth

   Conventional supervised learning methods typically assume i.i.d samples and are found to be sensitive to out-of-distribution (OOD) data. We propose Generative Causal Representation Learning (GCRL) which leverages causality to facilitate knowledge transfer under distribution shifts. While we evaluate the effectiveness of our proposed method in human trajectory prediction models, GCRL can be applied to other domains as well. First, we propose a novel causal model that explains the generative factors in motion forecasting datasets using features that are common across all environments and with features that are specific to each environment. Selection variables are used to determine which parts of the model can be directly transferred to a new environment without fine-tuning. Second, we propose an end-to-end variational learning paradigm to learn the causal mechanisms that generate observations from features. GCRL is supported by strong theoretical results that imply identifiability of the causal model under certain assumptions. Experimental results on synthetic and real-world motion forecasting datasets show the robustness and effectiveness of our proposed method for knowledge transfer under zero-shot and low-shot settings by substantially outperforming the prior motion forecasting models on out-of-distribution prediction.

5. Textbook

   Elements of Dimensionality Reduction and Manifold Learning

   Benyamin Ghojogh, Mark Crowley, Fakhri Karray, and Ali Ghodsi.

   Springer Nature, Feb, 2023.

   Abs URL

   Dimensionality reduction, also known as manifold learning, is an area of machine learning used for extracting informative features from data, for better representation of data or separation between classes. This book presents a cohesive review of linear and nonlinear dimensionality reduction and manifold learning. Three main aspects of dimensionality reduction are covered – spectral dimensionality reduction, probabilistic dimensionality reduction, and neural network-based dimensionality reduction, which have geometric, probabilistic, and information-theoretic points of view to dimensionality reduction, respectively. This book delves into basic concepts and recent developments in the field of dimensionality reduction and manifold learning, providing the reader with a comprehensive understanding. The necessary background and preliminaries, on linear algebra, optimization, and kernels, are also explained in the book to ensure a comprehensive understanding of the algorithms. The tools this book introduces are applied to various applications involving feature extraction, image processing, computer vision, and signal processing. This book is applicable to a wide audience who would like to acquire a deep understanding of the various ways to extract, transform, and understand the structure of data. The intended audiences are academics, students, and industry professionals. Academic researchers and students can use this book as a textbook for machine learning and dimensionality reduction. Data scientists, machine learning scientists, computer vision scientists, computer scientists, statisticians, and mathematicians in the fields of applied mathematics, statistical learning, Riemannian manifolds, subspace analysis, linear algebra, and optimization can use this book as a reference book for both technical and applied concepts. Industry professionals, including applied engineers, data engineers, and engineers in various fields of science dealing with machine learning, can use this book as a guidebook for feature extraction from their data as the raw data in industry often requires pre-processing. Data feature extraction is useful in various fields of science including engineering, physics, chemistry, biometrics, biomedical signals and images, etc. This book is structured as a reference textbook, so that it can be used for advanced courses, as an in-depth supplementary resource or for researchers or practitioners who want to learn about dimensionality reduction and manifold learning. The book is grounded in theory, but provides thorough explanations and diverse examples to improve the readers comprehension of the advanced topics. Advanced methods are explained in a step-by-step manner so that readers of all levels can follow the reasoning and come to a deep understanding of the concepts. This book does not assume the reader has an advanced theoretical background in machine learning and provides necessary background, though an undergraduate-level background in linear algebra and calculus is recommended.

6. Multi-Advisor-MARL

   Learning from Multiple Independent Advisors in Multi-agent Reinforcement Learning

   Sriram Ganapathi Subramanian, Matthew Taylor, Kate Larson, and Mark Crowley

   In Proceedings of the 22nd International Conference on Autonomous Agents and MultiAgent Systems (AAMAS). International Foundation for Autonomous Agents and Multiagent Systems (IFAAMAS), London, United Kingdom. Sep, 2023.

   Abs PDF

   Multi-agent reinforcement learning typically suffers from the problem of sample inefficiency, where learning suitable policies involves the use of many data samples. Learning from external demonstrators is a possible solution that mitigates this problem. However, most prior approaches in this area assume the presence of a single demonstrator. Leveraging multiple knowledge sources (i.e., advisors) with expertise in distinct aspects of the environment could substantially speed up learning in complex environments. This paper considers the problem of simultaneously learning from multiple independent advisors in multi-agent reinforcement learning. The approach leverages a two-level Q-learning architecture, and extends this framework from single-agent to multi-agent settings. We provide principled algorithms that incorporate a set of advisors by both evaluating the advisors at each state and subsequently using the advisors to guide action selection. Also, we provide theoretical convergence and sample complexity guarantees. Experimentally, we validate our approach in three different test-beds and show that our algorithms give better performances than baselines, can effectively integrate the combined expertise of different advisors, and learn to ignore bad advice.

2022

1. IOTSMS

   Aggressive Driver Behavior Detection using Parallel Convolutional Neural Networks on Simulated and Real Driving Data

   Zehra Camlica, Jim Quesenberry, Daniel Carballo, and Mark Crowley

   In 9th International Conference on Internet of Things: Systems, Management and Security (IOTSMS). IEEE, Milan, Italy. Nov, 2022.

   Abs PDF Slides URL

   The novel method proposed in this paper is com- promised of application of two Convolutional Neural Networks (CNN) working in parallel to simultaneously classify driver be- haviors while classifying maneuvers by using time series data. We claim that the Parallel Convolutional Neural Network (PCNN) not only speeds-up training time but also increases performance since having information about the maneuver helps to improve behavior classification performance and vice versa. In this study, both simulation and real-world driving datasets are utilized for driver behavior analysis. As simulation data, mobile phone sensor data are simulated as a time series using a combination of a traffic simulator (SUMO) and a car simulation system (Webots). The same type of data is collected with a specially designed vehicle traveled on a defined route around a predefined region. The collected data are then separately utilized as training and testing data for classification of both maneuvers (e.g turns and lane changes) and driver behaviors (e.g aggressive, non-aggressive) applying a novel method using deep learning on time series data. In addition, other methods which are commonly used for time series analysis, Hidden Markov Models(HMMs) and Recurrent Neural Networks (RNN), are applied to the same datasets to compare with PCNN. According to the results, the CNN classifiers perform efficiently for a single task and PCNN outperforms both single task-CNN and RNN with an average accuracy of 86%.

2. Robot Rescue

   Using Affect as a Communication Modality to Improve Human-Robot Communication in Robot-Assisted Search and Rescue Scenarios

   Sami Alperen Akgun, Moojan Ghafurian, Mark Crowley, and Kerstin Dautenhahn.

   IEEE Transactions on Affective Computing. arXiv, Nov, 2022.

   Abs arXiv PDF URL

   Emotions can provide a natural communication modality to complement the existing multi-modal capabilities of social robots, such as text and speech, in many domains. We conducted three online studies with 112, 223, and 151 participants to investigate the benefits of using emotions as a communication modality for Search And Rescue (SAR) robots. In the first experiment, we investigated the feasibility of conveying information related to SAR situations through robots’ emotions, resulting in mappings from SAR situations to emotions. The second study used Affect Control Theory as an alternative method for deriving such mappings. This method is more flexible, e.g. allows for such mappings to be adjusted for different emotion sets and different robots. In the third experiment, we created affective expressions for an appearance-constrained outdoor field research robot using LEDs as an expressive channel. Using these affective expressions in a variety of simulated SAR situations, we evaluated the effect of these expressions on participants’ (adopting the role of rescue workers) situational awareness. Our results and proposed methodologies provide (a) insights on how emotions could help conveying messages in the context of SAR, and (b) evidence on the effectiveness of adding emotions as a communication modality in a (simulated) SAR communication context.

3. Mean Field MARL

   Decentralized Mean Field Games

   Sriram Ganapathi Subramanian, Matthew Taylor, Mark Crowley, and Pascal Poupart.

   In Proceedings of the AAAI Conference on Artificial Intelligence (AAAI-2022). Virtual. Feb, 2022.

   Abs arXiv PDF URL Hypoth

   Multiagent reinforcement learning algorithms have not been widely adopted in large scale environments with many agents as they often scale poorly with the number of agents. Using mean field theory to aggregate agents has been proposed as a solution to this problem. However, almost all previous methods in this area make a strong assumption of a centralized system where all the agents in the environment learn the same policy and are effectively indistinguishable from each other. In this paper, we relax this assumption about indistinguishable agents and propose a new mean field system known as Decentralized Mean Field Games, where each agent can be quite different from others. All agents learn independent policies in a decentralized fashion, based on their local observations. We define a theoretical solution concept for this system and provide a fixed point guarantee for a Q-learning based algorithm in this system. A practical consequence of our approach is that we can address a ‘chicken-and-egg’ problem in empirical mean field reinforcement learning algorithms. Further, we provide Q-learning and actor-critic algorithms that use the decentralized mean field learning approach and give stronger performances compared to common baselines in this area. In our setting, agents do not need to be clones of each other and learn in a fully decentralized fashion. Hence, for the first time, we show the application of mean field learning methods in fully competitive environments, large-scale continuous action space environments, and other environments with heterogeneous agents. Importantly, we also apply the mean field method in a ride-sharing problem using a real-world dataset. We propose a decentralized solution to this problem, which is more practical than existing centralized training methods.

4. Multi-Advisor-QL

   Multi-Agent Advisor Q-Learning

   Sriram Ganapathi Subramanian, Kate Larson, Matthew Taylor, and Mark Crowley

   Journal of Artificial Intelligence Research (JAIR). 74, May, 2022.

   Abs PDF Code URL

   In the last decade, there have been significant advances in multi-agent reinforcement learning (MARL) but there are still numerous challenges, such as high sample complexity and slow convergence to stable policies, that need to be overcome before wide-spread deployment is possible. However, many real-world environments already, in practice, deploy sub-optimal or heuristic approaches for generating policies. An interesting question that arises is how to best use such approaches as advisors to help improve reinforcement learning in multi-agent domains. In this paper, we provide a principled framework for incorporating action recommendations from online sub-optimal advisors in multi-agent settings. We describe the problem of ADvising Multiple Intelligent Reinforcement Agents (ADMIRAL) in nonrestrictive general-sum stochastic game environments and present two novel Q-learning based algorithms: ADMIRAL - Decision Making (ADMIRAL-DM) and ADMIRAL - Advisor Evaluation (ADMIRAL-AE), which allow us to improve learning by appropriately incorporating advice from an advisor (ADMIRAL-DM), and evaluate the effectiveness of an advisor (ADMIRAL-AE). We analyze the algorithms theoretically and provide fixed point guarantees regarding their learning in general-sum stochastic games. Furthermore, extensive experi- ments illustrate that these algorithms: can be used in a variety of environments, have performances that compare favourably to other related baselines, can scale to large state-action spaces, and are robust to poor advice from advisors.

2021

1. MARLEmpircal

   Investigation of Independent Reinforcement Learning Algorithms in Multi-Agent Environments

   Ken Ming Lee, Sriram Ganapathi Subramanian, and Mark Crowley

   In NeurIPS 2021 Deep Reinforcement Learning Workshop. Dec, 2021.

   Abs arXiv

   Independent reinforcement learning algorithms have no theoretical guarantees for finding the best policy in multi-agent settings. However, in practice, prior works have reported good performance with independent algorithms in some domains and bad performance in others. Moreover, a comprehensive study of the strengths and weaknesses of independent algorithms is lacking in the literature. In this paper, we carry out an empirical comparison of the performance of independent algorithms on four PettingZoo environments that span the three main categories of multi-agent environments, i.e., cooperative, competitive, and mixed. We show that in fully-observable environments, independent algorithms can perform on par with multi-agent algorithms in cooperative and competitive settings. For the mixed environments, we show that agents trained via independent algorithms learn to perform well individually, but fail to learn to cooperate with allies and compete with enemies. We also show that adding recurrence improves the learning of independent algorithms in cooperative partially observable environments.

2. Acceleration of Large Margin Metric Learning for Nearest Neighbor Classification Using Triplet Mining and Stratified Sampling

   Parisa Poorheravi, Benyamin Ghojogh, Vincent Gaudet, Fakhri Karray, and Mark Crowley

   Journal of Computational Vision and Imaging Systems. 6, (1). Jan, 2021.

   Abs PDF URL

   Metric learning is a technique in manifold learning to find a projection subspace for increasing and decreasing the inter- and intra-class variances, respectively. Some metric learning methods are based on triplet learning with anchor-positive-negative triplets. Large margin metric learning for nearest neighbor classification is one of the fundamental methods to do this. Recently, Siamese networks have been introduced with the triplet loss. Many triplet mining methods have been developed for Siamese nets; however, these techniques have not been applied on the triplets of large margin metric learning. In this work, inspired by the mining methods for Siamese nets, we propose several triplet mining techniques for large margin metric learning. Moreover, a hierarchical approach is proposed, for acceleration and scalability of optimization, where triplets are selected by stratified sampling in hierarchical hyper-spheres. We analyze the proposed methods on three publicly available datasets.

3. NLP-DigiPath

   Analysis of Language Embeddings for Classification of Unstructured Pathology Reports

   Aishwarya Krishna Allada, Yuanxin Wang, Veni Jindal, Morteza Babaie, H.R. Tizhoosh, and Mark Crowley

   In International Conference of the IEEE Engineering in Medicine and Biology Society (EMBC). IEEE, Nov, 2021.

   Abs

   A pathology report is one of the most significant medical documents providing interpretive insights into the visual appearance of the patient’s biopsy sample. In digital pathology, high-resolution images of tissue samples are stored along with pathology reports. Despite the valuable information that pathology reports hold, they are not used in any systematic manner to promote computational pathology. In this work, we focus on analyzing the reports, which are generally unstructured documents written in English with sophisticated and highly specialized medical terminology. We provide a comparative analysis of various embedding models like BioBERT, Clinical BioBERT, BioMed-RoBERTa and Term Frequency-Inverse Document Frequency (TF-IDF), a traditional NLP technique, as well as the combination of embeddings from pre-trained models with TF-IDF. Our results demonstrate the effectiveness of various word embedding techniques for pathology reports.

4. PO-MFRL

   Partially Observable Mean Field Reinforcement Learning

   Sriram Ganapathi Subramanian, Matthew Taylor, Mark Crowley, and Pascal Poupart.

   In Proceedings of the 20th International Conference on Autonomous Agents and MultiAgent Systems (AAMAS). International Foundation for Autonomous Agents and Multiagent Systems, London, United Kingdom. May, 2021.

   Abs arXiv PDF

   Traditional multi-agent reinforcement learning algorithms are not scalable to environments with more than a few agents, since these algorithms are exponential in the number of agents. Recent research has introduced successful methods to scale multi-agent reinforcement learning algorithms to many agent scenarios using mean field theory. Previous work in this field assumes that an agent has access to exact cumulative metrics regarding the mean field behaviour of the system, which it can then use to take its actions. In this paper, we relax this assumption and maintain a distribution to model the uncertainty regarding the mean field of the system. We consider two different settings for this problem. In the first setting, only agents in a fixed neighbourhood are visible, while in the second setting, the visibility of agents is determined at random based on distances. For each of these settings, we introduce a Q-learning based algorithm that can learn effectively. We prove that this Q-learning estimate stays very close to the Nash Q-value (under a common set of assumptions) for the first setting. We also empirically show our algorithms outperform multiple baselines in three different games in the MAgents framework, which supports large environments with many agents learning simultaneously to achieve possibly distinct goals.

5. Amrl

   Active Measure Reinforcement Learning for Observation Cost Minimization: A framework for minimizing measurement costs in reinforcement learning

   Colin Bellinger, Rory Coles, Mark Crowley, and Isaac Tamblyn.

   In Canadian Conference on Artificial Intelligence. Springer, 2021.

   Abs arXiv PDF

   Markov Decision Processes (MDP) with explicit measurement cost are a class of en- vironments in which the agent learns to maximize the costed return. Here, we define the costed return as the discounted sum of rewards minus the sum of the explicit cost of measuring the next state. The RL agent can freely explore the relationship between actions and rewards but is charged each time it measures the next state. Thus, an op- timal agent must learn a policy without making a large number of measurements. We propose the active measure RL framework (Amrl) as a solution to this novel class of problem, and contrast it with standard reinforcement learning under full observability and planning under partially observability. We demonstrate that Amrl-Q agents learn to shift from a reliance on costly measurements to exploiting a learned transition model in order to reduce the number of real-world measurements and achieve a higher costed return. Our results demonstrate the superiority of Amrl-Q over standard RL methods, Q-learning and Dyna-Q, and POMCP for planning under a POMDP in environments with explicit measurement costs.

2020

1. iMondrian

   Isolation Mondrian Forest for Batch and Online Anomaly Detection

   Haoran Ma, Benyamin Ghojogh, Maria N Samad, Dongyu Zheng, and Mark Crowley

   In IEEE International Conference on Systems, Man, and Cybernetics (IEEE-SMC-2020). IEEE SMC, Toronto, Canada (virtual). Oct, 2020.

   Abs PDF

   We propose a new method, named isolation Mon- drian forest (iMondrian forest), for batch and online anomaly detection. The proposed method is a novel hybrid of isolation forest and Mondrian forest which are existing methods for batch anomaly detection and online random forest, respectively. iMondrian forest takes the idea of isolation, using the depth of a node in a tree, and implements it in the Mondrian forest structure. The result is a new data structure which can accept streaming data in an online manner while being used for anomaly detection. Our experiments show that iMondrian forest mostly performs better than isolation forest in batch settings and has better or comparable performance against other batch and online anomaly detection methods.

2. WildfireMLRev

   A review of machine learning applications in wildfire science and management

   Piyush Jain, Sean CP Coogan, Sriram Ganapathi Subramanian, Mark Crowley, Steve Taylor, and Mike D Flannigan.

   Environmental Reviews. 28, (3). Canadian Science Publishing, Jul, 2020.

   Abs arXiv PDF Slides URL

   Artificial intelligence has been applied in wildfire science and management since the 1990s, with early applications including neural networks and expert systems. Since then the field has rapidly progressed congruently with the wide adoption of machine learning (ML) methods in the environmental sciences. Here, we present a scoping review of ML applications in wildfire science and management. Our overall objective is to improve awareness of ML methods among wildfire researchers and managers, as well as illustrate the diverse and challenging range of problems in wildfire science available to ML data scientists. To that end, we first present an overview of popular ML approaches used in wildfire science to date, and then review the use of ML in wildfire science as broadly categorized into six problem domains, including: 1) fuels characterization, fire detection, and mapping; 2) fire weather and climate change; 3) fire occurrence, susceptibility, and risk; 4) fire behavior prediction; 5) fire effects; and 6) fire management. Furthermore, we discuss the advantages and limitations of various ML approaches relating to data size, computational requirements, generalizability, and interpretability, as well as identify opportunities for future advances in the science and management of wildfires within a data science context. In total, we identified 298 relevant publications, where the most frequently used ML methods across problem domains included random forests, MaxEnt, artificial neural networks, decision trees, support vector machines, and genetic algorithms. As such, there exists opportunities to apply more current ML methods — including deep learning and agent based learning — in the wildfire sciences, especially in instances involving very large multivariate datasets. We must recognize, however, that despite the ability of ML models to learn on their own, expertise in wildfire science is necessary to ensure realistic modelling of fire processes across multiple scales, while the complexity of some ML methods, such as deep learning, requires a dedicated and sophisticated knowledge of their application. Finally, we stress that the wildfire research and management communities play an active role in providing relevant, high quality, and freely available wildfire data for use by practitioners of ML methods.

3. Distributed Nonlinear Model Predictive Control and Metric Learning for Heterogeneous Vehicle Platooning with Cut-in/Cut-out Maneuvers

   Mohammad Hossein Basiri, Benyamin Ghojogh, Nasser L Azad, Sebastian Fischmeister, Fakhri Karray, and Mark Crowley

   In Proceeding of the 59th IEEE Conference on Decision and Control (CDC-2020). Jeju Island, Korea (virtual). Dec, 2020.

2019

1. Instance Ranking and Numerosity Reduction Using Matrix Decompositionand Subspace Learning

   Benyamin Ghojogh, and Mark Crowley

   In Canadian Conference on Artificial Intelligence. Springer’s Lecture Notes in Artificial Intelligence., Kingston, ON, Canada. 2019.

   Abs

   One way to deal with the ever increasing amount of available data for processing is to rank data instances by usefulness and reduce the dataset size. In this work, we introduce a framework to achieve this using matrix decomposition and subspace learning. Our central contribution is a novel similarity measure for data instances that uses the basis obtained from matrix decomposition of the dataset. Using this similarity measure, we propose several related algorithms for ranking data instances and performing numerosity reduction. We then validate the effectiveness of these algorithms for data reduction on several datasets for classification, regression, and clustering tasks.

2. ECML

   Compact Representation of a Multi-dimensional Combustion Manifold Using Deep Neural Networks

   Sushrut Bhalla, Matthew Yao, Jean-Pierre Hickey, and Mark Crowley

   In European Conference on Machine Learning (ECML-19). Wurzburg, Germany. 2019.

   Abs PDF Poster Slides

   The computational challenges in turbulent combustion simulations stem from the physical complexities and multi-scale nature of the problem which make it intractable to compute scaleesolving simulations. For most engineering applications, the large scale separation between the flame (typically submillimeter scale) and the characteristic turbulent flow (typically centimeter or meter scale) allows us to evoke simplifying assumptions–such as done for the flamelet model to precompute all the chemical reactions and map them to a low order manifold. The resulting manifold is then tabulated and looked up at runtime. As the physical complexity of combustion simulations increases (including radiation, soot formation, pressure variations etc.) the dimensionality of the resulting manifold grows which impedes an efficient tabulation and look up. In this paper we present a novel approach to model the multidimensional combustion manifold. We approximate the combustion manifold using a neural network function approximator and use it to predict the temperature and composition of the reaction. We present a novel training procedure which is developed to generate a smooth output curve for temperature over the course of a reaction. We then evaluate our work against the current approach of tabulation with linear interpolation in combustion simulations. We also provide an ablation study of our training procedure in the context of overfitting in our model. The combustion dataset used for the modeling of combustion of H2 and O2 in this work is released alongside this paper.

3. Training Cooperative Agents for Multi-Agent Reinforcement Learning

   Sushrut Bhalla, Sriram Ganapathi Subramanian, and Mark Crowley

   In Proc. of the 18th International Conference on Autonomous Agents and Multiagent Systems (AAMAS 2019). Montreal, Canada. 2019.

2018

1. MCTS+A3C

   Combining MCTS and A3C for prediction of spatially spreading processes in forest wildfire settings

   Sriram Ganapathi Subramanian, and Mark Crowley

   In Canadian Conference on Artificial Intelligence. Toronto, Ontario, Canada. 2018.

   Abs PDF URL

   In recent years, Deep Reinforcement Learning (RL) algorithms have shown super-human performance in a variety Atari and classic board games like chess and GO. Research into applications of RL in other domains with spatial considerations like environmental planning are still in their nascent stages. In this paper, we introduce a novel combination of Monte-Carlo Tree Search (MCTS) and A3C algorithms on an online simulator of a wildfire, on a pair of forest fires in Northern Alberta (Fort McMurray and Richardson fires) and on historical Saskatchewan fires previously compared by others to a physics-based simulator. We conduct several experiments to predict fire spread for several days before and after the given spatial information of fire spread and ignition points. Our results show that the advancements in Deep RL applications in the gaming world have advantages in spatially spreading real-world problems like forest fires. \textcopyright Springer International Publishing AG, part of Springer Nature 2018.

2. Using Spatial Reinforcement Learning to Build Forest Wildfire Dynamics Models From Satellite Images

   Sriram Ganapathi Subramanian, and Mark Crowley

   Frontiers in ICT. 5, (6). Frontiers, Apr, 2018.

   Abs PDF URL

   Machine learning algorithms have increased tremendously in power in recent years but have yet to be fully utilized in many ecology and sustainable resource management domains such as wildlife reserve design, forest fire management and invasive species spread. One thing these domains have in common is that they contain dynamics that can be characterized as a Spatially Spreading Process (SSP) which requires many parameters to be set precisely to model the dynamics, spread rates and directional biases of the elements which are spreading. We present related work in Artificial Intelligence and Machine Learning for SSP sustainability domains including forest wildfire prediction. We then introduce a novel approach for learning in SSP domains using Reinforcement Learning (RL) where fire is the agent at any cell in the landscape and the set of actions the fire can take from a location at any point in time includes spreading North, South, East, West or not spreading. This approach inverts the usual RL setup since the dynamics of the corresponding Markov Decision Process (MDP) is a known function for immediate wildfire spread. Meanwhile, we learn an agent policy for a predictive model of the dynamics of a complex spatially-spreading process. Rewards are provided for correctly classifying which cells are on fire or not compared to satellite and other related data. We examine the behaviour of five RL algorithms on this problem: Value Iteration, Policy Iteration, Q-Learning, Monte Carlo Tree Search and Asynchronous Advantage Actor-Critic (A3C). We compare to a Gaussian process based supervised learning approach and discuss the relation of our approach to manually constructed, state-of-the-art methods from forest wildfire modelling. We also discuss the relation of our approach to manually constructed, state-of-the-art methods from forest wildfire modelling. We validate our approach with satellite image data of two massive wildfire events in Northern Alberta, Canada, the Fort McMurray fire of 2016 and the Richardson fire of 2011. The results show that we can learn predictive, agent-based policies as models of spatial dynamics using RL on readily available satellite images that other methods and have many additional advantages in terms of generalizability and interpretability.

2017

1. Learning Forest Wildfire Dynamics from Satellite Images Using Reinforcement Learning

   Sriram Ganapathi Subramanian, and Mark Crowley

   In Conference on Reinforcement Learning and Decision Making. Ann Arbor, MI, USA.. 2017.
2. AI Education Through Real World Problems

   markcrowley.

   In The Seventh Symposium on Educational Advances in Artificial Intellgience.. San Francisco, USA.. 2017.

2016

1. Anomaly Detection Using Inter-Arrival Curves for Real-time Systems

   Mahmoud Salem, Mark Crowley, and Sebastian Fischmeister.

   In 2016 28th Euromicro Conference on Real-Time Systems. Toulouse, France. Jul, 2016.

   Abs URL

   —Real-time embedded systems are a significant class of applications, poised to grow even further as automated vehicles and the Internet of Things become a reality. An important problem for these systems is to detect anomalies during operation. Anomaly detection is a form of classification, which can be driven by data collected from the system at execution time. We propose inter-arrival curves as a novel analytic modelling technique for discrete event traces. Our approach relates to the existing technique of arrival curves and expands the technique to anomaly detection. Inter-arrival curves analyze the behaviour of events within a trace by providing upper and lower bounds to their inter-arrival occurrence. We exploit inter-arrival curves in a classification framework that detects deviations within these bounds for anomaly detection. Also, we show how inter-arrival curves act as good features to extract recurrent behaviour that these systems often exhibit. We demonstrate the feasibility and viability of the fully implemented approach with an industrial automotive case study (CAN traces) as well as a deployed aerospace case study (RTOS kernel traces).

2015

1. PAC Optimal MDP Planning with Application to Invasive Species Management

   Majid Alkaee Taleghan, Thomas G. Dietterich, Mark Crowley, Kim Hall, and H. Jo Albers.

   Journal of Machine Learning Research. 16, 2015.

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   In a simulator-defined MDP, the Markovian dynamics and rewards are provided in the form of a simulator from which samples can be drawn. This paper studies MDP planning algorithms that attempt to minimize the number of simulator calls before terminating and outputting a policy that is approximately optimal with high probability. The paper introduces two heuristics for efficient exploration and an improved confidence interval that enables earlier termination with probabilis- tic guarantees. We prove that the heuristics and the confidence interval are sound and produce with high probability an approximately optimal policy in polynomial time. Experiments on two benchmark problems and two instances of an invasive species management problem show that the improved confidence intervals and the new search heuristics yield reductions of between 8% and 47% in the number of simulator calls required to reach near-optimal policies.

2014

1. Using equilibrium policy gradients for spatiotemporal planning in forest ecosystem management

   markcrowley.

   IEEE Transactions on Computers. 63, (1). IEEE computer Society Digital Library. IEEE Computer Society., 2014.

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   Spatiotemporal planning involves making choices at multiple locations in space over some planning horizon to maximize utility and satisfy various constraints. In Forest Ecosystem Management, the problem is to choose actions for thousands of locations each year including harvesting, treating trees for fire or pests, or doing nothing. The utility models could place value on sale of lumber, ecosystem sustainability or employment levels and incorporate legal and logistical constraints on actions such as avoiding large contiguous areas of clearcutting. Simulators developed by forestry researchers provide detailed dynamics but are generally inaccesible black boxes. We model spatiotemporal planning as a factored Markov decision process and present a policy gradient planning algorithm to optimize a stochastic spatial policy using simulated dynamics. It is common in environmental and resource planning to have actions at different locations be spatially interelated, this makes representation and planning challenging. We define a global spatial policy in terms of interacting local policies defining distributions over actions at each location conditioned on actions at nearby locations. Markov chain Monte Carlo simulation is used to sample landscape policies and estimate their gradients. Evaluation is carried out on a forestry planning problem with 1,880 locations using a variety of value models and constraints. Index

2013

1. Allowing a wildfire to burn: Estimating the effect on future fire suppression costs

   Rachel M. Houtman, Claire A. Montgomery, Aaron R. Gagnon, David E. Calkin, Thomas G. Dietterich, Sean McGregor, and Mark Crowley

   International Journal of Wildland Fire. 22, (7). 2013.

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   Where a legacy of aggressive wildland fire suppression has left forests in need of fuel reduction, allowing wildland fire to burn may provide fuel treatment benefits, thereby reducing suppression costs from subsequent fires. The least-cost-plus-net-value-change model of wildland fire economics includes benefits of wildfire in a framework for evaluating suppression options. In this study, we estimated one component of that benefit – the expected present value of the reduction in suppression costs for subsequent fires arising from the fuel treatment effect of a current fire. To that end, we employed Monte Carlo methods to generate a set of scenarios for subsequent fire ignition and weather events, which are referred to as sample paths, for a study area in central Oregon. We simulated fire on the landscape over a 100-year time horizon using existing models of fire behaviour, vegetation and fuels development, and suppression effectiveness, and we estimated suppression costs using an existing suppression cost model. Our estimates suggest that the potential cost savings may be substantial. Further research is needed to estimate the full least-cost-plus-net-value-change model. This line of research will extend the set of tools available for developing wildfire management plans for forested landscapes.

2. PAC Optimal Planning for Invasive Species Management: Improved Exploration for Reinforcement Learning from Simulator-Defined MDPs

   Thomas G Dietterich, Majid Alkaee Taleghan, and Mark Crowley

   In Proceedings of the AAAI Conference on Artificial Intelligence (AAAI-2013). Bellevue, WA, USA. 2013.

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   Often the most practical way to define a Markov Decision Process (MDP) is as a simulator that, given a state and an action, produces a resulting state and immediate reward sampled from the corresponding distributions. Simulators in natural resource management can be very expensive to execute, so that the time required to solve such MDPs is dominated by the number of calls to the simulator. This paper presents an algorithm, DDV, that combines improved confidence intervals on the Q values (as in interval estimation) with a novel upper bound on the discounted state occupancy probabilities to intelligently choose state-action pairs to explore. We prove that this algorithm terminates with a policy whose value is within εof the optimal policy (with probability 1−δ) after making only polynomially-many calls to the simulator. Experiments on one benchmark MDP and on an MDP for invasive species management show very large reductions in the number of simulator calls required.

3. Cyclic causal models with discrete variables: Markov chain equilibrium semantics and sample ordering

   David Poole, and Mark Crowley

   In International Joint Conference on Artificial Intelligence (IJCAI). Beijing, China. 2013.

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   We analyze the foundations of cyclic causal models for discrete variables, and compare structural equation models (SEMs) to an alternative semantics as the equilibrium (stationary) distribution of a Markov chain. We show under general conditions, discrete cyclic SEMs cannot have independent noise, even in the simplest case, cyclic structural equation models imply constraints on the noise. We give a formalization of an alternative Markov chain equilibrium semantics which requires not only the causal graph, but also a sample order. We show how the resulting equilibrium is a function of the sample ordering, both theoretically and empirically.

4. Policy Gradient Optimization Using Equilibrium Policies for Spatial Planning Domains

   markcrowley.

   In 13th INFORMS Computing Society Conference. Santa Fe, NM, United States. 2013.

2012

2011

1. Policy gradient planning for environmental decision making with existing simulators

   Mark Crowley, and David Poole.

   In Proceedings of the Twenty-Fifth Conference on Artificial Intelligence (AAAI). San Francisco. 2011.

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   In environmental and natural resource planning domains actions are taken at a large number of locations over multiple time periods. These problems have enormous state and action spaces, spatial correlation between actions, uncertainty and complex utility models. We present an approach for modeling these planning problems as factored Markov decision processes. The reward model can contain local and global components as well as spatial constraints between locations. The transition dynamics can be provided by existing simulators developed by domain experts. We propose a landscape policy defined as the equilibrium distribution of a Markov chain built from many locally-parameterized policies. This policy is optimized using a policy gradient algorithm. Experiments using a forestry simulator demonstrate the algorithm’s ability to devise policies for sustainable harvest planning of a forest. Copyright \textcopyright 2011, Association for the Advancement of Artificial Intelligence. All rights reserved.

2009

1. Seeing the Forest Despite the Trees : Large Scale Spatial-Temporal Decision Making

   Mark Crowley, John Nelson, and David Poole.

   In Conference on Uncertainty in Artificial Intelligence (UAI09). Montreal, Canada. 2009.

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   We introduce a challenging real world planning problem where actions must be taken at each location in a spatial area at each point in time. We use forestry planning as the motivating application. In Large Scale Spatial-Temporal (LSST) planning problems, the state and action spaces are defined as the cross-products of many local state and action spaces spread over a large spatial area such as a city or forest. These problems possess state uncertainty, have complex utility functions involving spatial constraints and we generally must rely on simulations rather than an explicit transition model. We define LSST problems as reinforcement learning prob- lems and present a solution using policy gradients. We compare two different policy formulations: an explicit policy that identifies each location in space and the action to take there, and an abstract policy that defines the proportion of actions to take across all locations in space. We show that the abstract policy is more robust and achieves higher rewards with far fewer parameters than the elementary policy. This abstract policy is also a better fit to the properties that practitioners in LSST problem domains require for such methods to be widely useful

2007